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AMTraK: Automated Multi-Peak Tracking Kymography

This page contains the links to the program source-code of AMTraK written in MATLAB 2010b and compable with MATLAB R2014b (Win64, Mac OSX, Linux Ubuntu) using the following toolboxes:
  1. Image Processing toolbox ver.7.3
  2. Statistics toolbox ver. 7.3


The software can also be downloaded from GitHub at https://github.com/athale/AMTraK

This is associated with the report by Chaphalkar et al. which describes the kymograph analysis tool. The code is released on the basis of GNU General Public License (GPL) and may be used and modified. Kindly cite the work of Chaphalkar and Athale if you use it (currently this URL: http://www.iiserpune.ac.in/~cathale/SupplementaryMaterial/Amtrak.html). The work has been supported by the Department of Biotechnology, Govt. of India, University Grants Commission, India and IISER Pune core-funding.
How to cite this work. Chaphalkar AR, Jain K, Gangan MS, Athale CA (2016) Automated Multi-Peak Tracking Kymography (AMTraK): A Tool to Quantify Sub-Cellular Dynamics with Sub-Pixel Accuracy. PLoS ONE 11(12): e0167620. doi:10.1371/journal.pone.0167620
Please contact Anushree Chaphalkar (firstname lastname at students.iiserpune.ac.in) or Chaitanya Athale (cathale at iiserpune ac in)-- substitute spaces by dots) for queries about the code.
Last updated: 3-July-2017